Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF216Q9NWF9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF216Q9NWF9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RNF216Q9NWF9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF216Q9NWF9 MTCYBP7-201ENST00000419540 1134 ntBASIC20.83■□□□□ 0.93
RNF216Q9NWF9 MORF4L1P7-201ENST00000426038 703 ntBASIC20.83■□□□□ 0.93
RNF216Q9NWF9 AC013402.3-201ENST00000438566 451 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF216Q9NWF9 AC092106.1-201ENST00000444291 373 ntBASIC20.83■□□□□ 0.93
RNF216Q9NWF9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF216Q9NWF9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF216Q9NWF9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF216Q9NWF9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF216Q9NWF9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF216Q9NWF9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.83■□□□□ 0.92
RNF216Q9NWF9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF216Q9NWF9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.83■□□□□ 0.92
RNF216Q9NWF9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 LINC01465-201ENST00000408887 1940 ntBASIC20.82■□□□□ 0.92
RNF216Q9NWF9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 AC090340.1-201ENST00000620778 4980 ntBASIC20.82■□□□□ 0.92
RNF216Q9NWF9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 BOLA3P3-201ENST00000505182 232 ntBASIC20.82■□□□□ 0.92
RNF216Q9NWF9 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 AP001505.1-201ENST00000569966 824 ntBASIC20.82■□□□□ 0.92
RNF216Q9NWF9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 AC067773.1-201ENST00000603284 1094 ntBASIC20.82■□□□□ 0.92
RNF216Q9NWF9 AP003072.3-201ENST00000623456 594 ntBASIC20.82■□□□□ 0.92
RNF216Q9NWF9 AP003485.1-201ENST00000625093 753 ntBASIC20.82■□□□□ 0.92
RNF216Q9NWF9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF216Q9NWF9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 AC016598.1-201ENST00000340585 560 ntTSL 4 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 AL354692.1-201ENST00000423044 315 ntBASIC20.81■□□□□ 0.92
RNF216Q9NWF9 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 CARD8-214ENST00000520007 614 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 AL137802.2-201ENST00000562878 1110 ntBASIC20.81■□□□□ 0.92
RNF216Q9NWF9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 AC068790.2-201ENST00000602601 557 ntBASIC20.81■□□□□ 0.92
RNF216Q9NWF9 AC008592.5-201ENST00000607856 547 ntBASIC20.81■□□□□ 0.92
RNF216Q9NWF9 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC20.81■□□□□ 0.92
RNF216Q9NWF9 AL354696.1-201ENST00000614652 497 ntBASIC20.81■□□□□ 0.92
RNF216Q9NWF9 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 AC023050.4-201ENST00000538830 1380 ntBASIC20.81■□□□□ 0.92
RNF216Q9NWF9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF216Q9NWF9 HCG11-201ENST00000411553 5696 ntBASIC20.81■□□□□ 0.92
RNF216Q9NWF9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RNF216Q9NWF9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms