Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 KLF4P1-201ENST00000412782 1185 ntBASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 ATP6V0CP3-201ENST00000417255 467 ntBASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 PDPK2P-202ENST00000562415 1191 ntBASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 AL078644.1-201ENST00000609881 752 ntBASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC25.54■■□□□ 1.68
SLC52A1Q9NWF4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 AC096734.2-201ENST00000562054 433 ntBASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SLC52A1Q9NWF4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 AC116562.4-201ENST00000641316 2276 ntBASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 AL031598.1-201ENST00000561511 1773 ntBASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 CD82-202ENST00000342935 967 ntTSL 5 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SLC52A1Q9NWF4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
SLC52A1Q9NWF4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 AC018445.3-201ENST00000624177 1945 ntBASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 RHOQP3-201ENST00000437982 621 ntBASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 CEND1P1-201ENST00000451006 455 ntBASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC52A1Q9NWF4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 MRPL20P1-201ENST00000400819 433 ntBASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms