Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RLIMQ9NVW2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.77■□□□□ 0.27
RLIMQ9NVW2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RLIMQ9NVW2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RLIMQ9NVW2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RLIMQ9NVW2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RLIMQ9NVW2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 KRT18P22-201ENST00000402024 1347 ntBASIC16.76■□□□□ 0.27
RLIMQ9NVW2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 AC087499.1-201ENST00000418141 1075 ntBASIC16.76■□□□□ 0.27
RLIMQ9NVW2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 AL512604.3-201ENST00000569583 964 ntBASIC16.76■□□□□ 0.27
RLIMQ9NVW2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 AC093010.1-201ENST00000473625 1624 ntBASIC16.76■□□□□ 0.27
RLIMQ9NVW2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RLIMQ9NVW2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 ECEL1P3-201ENST00000427961 737 ntBASIC16.75■□□□□ 0.27
RLIMQ9NVW2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 NEK4P2-201ENST00000580004 1012 ntBASIC16.75■□□□□ 0.27
RLIMQ9NVW2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.75■□□□□ 0.27
RLIMQ9NVW2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 AC145285.6-201ENST00000604632 637 ntBASIC16.74■□□□□ 0.27
RLIMQ9NVW2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms