Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 KRT8P9-201ENST00000558927 1449 ntBASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 AC096733.2-201ENST00000609937 1394 ntBASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 FLJ13224-201ENST00000313737 1514 ntBASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCF3Q9NUQ8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 UBALD1-205ENST00000590891 2641 ntBASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCF3Q9NUQ8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ABCF3Q9NUQ8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
ABCF3Q9NUQ8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ABCF3Q9NUQ8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms