Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LIN7CQ9NUP9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 ECEL1P2-202ENST00000465689 757 ntBASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 AC009065.1-201ENST00000564055 1225 ntBASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 AC005363.2-201ENST00000618631 242 ntBASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.96□□□□□ -0.01
LIN7CQ9NUP9 AL163051.1-201ENST00000569214 1512 ntBASIC14.96□□□□□ -0.02
LIN7CQ9NUP9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.96□□□□□ -0.02
LIN7CQ9NUP9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LIN7CQ9NUP9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
LIN7CQ9NUP9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LIN7CQ9NUP9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LIN7CQ9NUP9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 SLC25A3P1-201ENST00000443844 931 ntBASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 FAM87A-204ENST00000613235 858 ntBASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 KRT18P55-202ENST00000578578 1546 ntBASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 AC093010.1-201ENST00000473625 1624 ntBASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
LIN7CQ9NUP9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 AC006116.8-202ENST00000587620 1550 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms