Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CISHQ9NSE2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CISHQ9NSE2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CISHQ9NSE2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CISHQ9NSE2 AP002383.4-201ENST00000442518 975 ntBASIC19.16■□□□□ 0.66
CISHQ9NSE2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.16■□□□□ 0.66
CISHQ9NSE2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CISHQ9NSE2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CISHQ9NSE2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CISHQ9NSE2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CISHQ9NSE2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.16■□□□□ 0.66
CISHQ9NSE2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CISHQ9NSE2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CISHQ9NSE2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CISHQ9NSE2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CISHQ9NSE2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.16■□□□□ 0.66
CISHQ9NSE2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CISHQ9NSE2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.16■□□□□ 0.66
CISHQ9NSE2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CISHQ9NSE2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.15■□□□□ 0.66
CISHQ9NSE2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.15■□□□□ 0.66
CISHQ9NSE2 AL845331.1-201ENST00000424978 1190 ntBASIC19.15■□□□□ 0.66
CISHQ9NSE2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 AC069148.1-201ENST00000608741 768 ntBASIC19.15■□□□□ 0.66
CISHQ9NSE2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CISHQ9NSE2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CISHQ9NSE2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CISHQ9NSE2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CISHQ9NSE2 AC068880.1-201ENST00000507289 2297 ntBASIC19.14■□□□□ 0.66
CISHQ9NSE2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CISHQ9NSE2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.14■□□□□ 0.66
CISHQ9NSE2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CISHQ9NSE2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.14■□□□□ 0.65
CISHQ9NSE2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 AL353801.3-201ENST00000609898 542 ntBASIC19.13■□□□□ 0.65
CISHQ9NSE2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 KRT18P1-202ENST00000452408 1331 ntBASIC19.13■□□□□ 0.65
CISHQ9NSE2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms