Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MYO15B-237ENST00000642007 4893 ntBASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CDC42SE1Q9NRR8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 AC022532.1-201ENST00000624563 1728 ntBASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 PCDHA3-202ENST00000532566 4594 ntBASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 AL034346.1-201ENST00000568244 1277 ntBASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CDC42SE1Q9NRR8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms