Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 TNXA-203ENST00000507684 2038 ntBASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.28■□□□□ 0.52
SPHK2Q9NRA0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.27■□□□□ 0.52
SPHK2Q9NRA0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPHK2Q9NRA0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
SPHK2Q9NRA0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.27■□□□□ 0.51
SPHK2Q9NRA0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SPHK2Q9NRA0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SPHK2Q9NRA0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.27■□□□□ 0.51
SPHK2Q9NRA0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 AC135776.1-201ENST00000319817 2481 ntBASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 RPS2P1-201ENST00000434010 821 ntBASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 SLC25A1P1-201ENST00000528351 927 ntBASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 NKAPP1-205ENST00000585790 367 ntBASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 AL671883.3-201ENST00000603274 991 ntBASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 AC025062.2-201ENST00000605477 670 ntBASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SPHK2Q9NRA0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 AC103564.2-201ENST00000432853 1299 ntBASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
SPHK2Q9NRA0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms