Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 TSPY22P-201ENST00000427496 604 ntBASIC16.94■□□□□ 0.3
KLHL1Q9NR64 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.94■□□□□ 0.3
KLHL1Q9NR64 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 AC126763.1-201ENST00000552015 2118 ntBASIC16.93■□□□□ 0.3
KLHL1Q9NR64 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 MIR662-201ENST00000384847 95 ntBASIC16.93■□□□□ 0.3
KLHL1Q9NR64 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 KRT8P26-201ENST00000534154 1276 ntBASIC16.93■□□□□ 0.3
KLHL1Q9NR64 RNF126P1-202ENST00000569893 925 ntBASIC16.93■□□□□ 0.3
KLHL1Q9NR64 MIR3652-201ENST00000579335 131 ntBASIC16.93■□□□□ 0.3
KLHL1Q9NR64 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 HEIH-201ENST00000623091 1652 ntBASIC16.93■□□□□ 0.3
KLHL1Q9NR64 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL1Q9NR64 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 OR6D1P-203ENST00000641209 4860 ntBASIC16.92■□□□□ 0.3
KLHL1Q9NR64 AL357033.4-201ENST00000617703 1807 ntBASIC16.92■□□□□ 0.3
KLHL1Q9NR64 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 PRELID1P1-202ENST00000567272 903 ntBASIC16.92■□□□□ 0.3
KLHL1Q9NR64 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
KLHL1Q9NR64 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms