Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 AC105036.2-201ENST00000569468 176 ntBASIC21.22■□□□□ 0.99
RTN4Q9NQC3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 AC104417.2-201ENST00000562989 1793 ntBASIC21.22■□□□□ 0.99
RTN4Q9NQC3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.22■□□□□ 0.99
RTN4Q9NQC3 TCAF2P1-201ENST00000291129 2421 ntBASIC21.21■□□□□ 0.99
RTN4Q9NQC3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 AL390719.1-204ENST00000412397 1219 ntBASIC21.21■□□□□ 0.99
RTN4Q9NQC3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 AF201337.1-201ENST00000520239 748 ntBASIC21.21■□□□□ 0.99
RTN4Q9NQC3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 AC073111.5-205ENST00000641717 521 ntBASIC21.21■□□□□ 0.99
RTN4Q9NQC3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 AC006480.2-201ENST00000609770 1337 ntBASIC21.21■□□□□ 0.99
RTN4Q9NQC3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 SDHAP1-207ENST00000440850 2000 ntBASIC21.21■□□□□ 0.99
RTN4Q9NQC3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RTN4Q9NQC3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 AC080038.1-201ENST00000611274 1154 ntBASIC21.2■□□□□ 0.98
RTN4Q9NQC3 AC092437.1-201ENST00000624794 1048 ntBASIC21.2■□□□□ 0.98
RTN4Q9NQC3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 AC124283.5-201ENST00000624661 1809 ntBASIC21.2■□□□□ 0.98
RTN4Q9NQC3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4Q9NQC3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 LINC00602-201ENST00000629776 2065 ntBASIC21.19■□□□□ 0.98
RTN4Q9NQC3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms