Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 AC009949.1-201ENST00000623048 1830 ntBASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 AC004870.1-201ENST00000315132 882 ntBASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 AC132008.2-207ENST00000454517 770 ntBASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G1Q9HCP0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 SAPCD2P3-201ENST00000455031 850 ntBASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 AL121894.2-201ENST00000602977 491 ntBASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G1Q9HCP0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G1Q9HCP0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.71■□□□□ 0.58
CSNK1G1Q9HCP0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms