Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CLK4Q9HAZ1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.52■□□□□ 0.39
CLK4Q9HAZ1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLK4Q9HAZ1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CLK4Q9HAZ1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CLK4Q9HAZ1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.52■□□□□ 0.39
CLK4Q9HAZ1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 SLC25A6P5-201ENST00000435663 894 ntBASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 AC010240.3-201ENST00000607688 395 ntBASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 AC024243.1-201ENST00000609234 778 ntBASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CLK4Q9HAZ1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 AL049597.2-201ENST00000565575 961 ntBASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLK4Q9HAZ1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 AC092647.4-201ENST00000457211 535 ntBASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 AC022616.7-201ENST00000525383 220 ntBASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.49■□□□□ 0.39
CLK4Q9HAZ1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms