Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 AC008694.1-202ENST00000636953 945 ntBASIC17.14■□□□□ 0.33
VCX3BQ9H321 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VCX3BQ9H321 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
VCX3BQ9H321 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.13■□□□□ 0.33
VCX3BQ9H321 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 AC096631.2-201ENST00000436136 790 ntBASIC17.13■□□□□ 0.33
VCX3BQ9H321 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 KRT18P41-201ENST00000518924 1277 ntBASIC17.13■□□□□ 0.33
VCX3BQ9H321 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 AL160286.2-201ENST00000567150 934 ntBASIC17.13■□□□□ 0.33
VCX3BQ9H321 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
VCX3BQ9H321 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VCX3BQ9H321 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 HYMAI-201ENST00000635591 3347 ntBASIC17.12■□□□□ 0.33
VCX3BQ9H321 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms