Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 RARRES2P7-201ENST00000567349 469 ntBASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 AC006486.2-201ENST00000624246 2199 ntBASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 AC027612.1-201ENST00000445234 2395 ntBASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 AC021231.2-201ENST00000594613 730 ntBASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 AC007292.2-201ENST00000593524 1812 ntBASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CYSTM1Q9H1C7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 OR6D1P-203ENST00000641209 4860 ntBASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 REST-210ENST00000638187 1334 ntTSL 5 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.36□□□□□ -0.75
CYSTM1Q9H1C7 AC005912.2-201ENST00000619492 2400 ntBASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms