Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PTPN18Q99952 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN18Q99952 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN18Q99952 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN18Q99952 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.48■□□□□ 0.87
PTPN18Q99952 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN18Q99952 AL049757.1-201ENST00000616842 1596 ntBASIC20.48■□□□□ 0.87
PTPN18Q99952 NCF1C-201ENST00000438382 1427 ntBASIC20.48■□□□□ 0.87
PTPN18Q99952 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
PTPN18Q99952 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN18Q99952 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PTPN18Q99952 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN18Q99952 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN18Q99952 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN18Q99952 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN18Q99952 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PTPN18Q99952 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.48■□□□□ 0.87
PTPN18Q99952 AP000344.2-201ENST00000512987 629 ntBASIC20.48■□□□□ 0.87
PTPN18Q99952 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.48■□□□□ 0.87
PTPN18Q99952 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.48■□□□□ 0.87
PTPN18Q99952 AC096734.2-201ENST00000562054 433 ntBASIC20.48■□□□□ 0.87
PTPN18Q99952 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PTPN18Q99952 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PTPN18Q99952 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PTPN18Q99952 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN18Q99952 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PTPN18Q99952 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PTPN18Q99952 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.48■□□□□ 0.87
PTPN18Q99952 BCAR1-209ENST00000546196 1340 ntBASIC20.48■□□□□ 0.87
PTPN18Q99952 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PTPN18Q99952 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN18Q99952 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN18Q99952 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPN18Q99952 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPN18Q99952 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPN18Q99952 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PTPN18Q99952 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
PTPN18Q99952 FAM58CP-201ENST00000435741 640 ntBASIC20.47■□□□□ 0.87
PTPN18Q99952 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 OR7E47P-204ENST00000575924 449 ntBASIC20.47■□□□□ 0.87
PTPN18Q99952 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PTPN18Q99952 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN18Q99952 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN18Q99952 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN18Q99952 AFG3L1P-217ENST00000557444 2447 ntBASIC20.46■□□□□ 0.87
PTPN18Q99952 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN18Q99952 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN18Q99952 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN18Q99952 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN18Q99952 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN18Q99952 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN18Q99952 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.46■□□□□ 0.87
PTPN18Q99952 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN18Q99952 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.46■□□□□ 0.87
PTPN18Q99952 RHOQP3-201ENST00000437982 621 ntBASIC20.46■□□□□ 0.87
PTPN18Q99952 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PTPN18Q99952 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.46■□□□□ 0.87
PTPN18Q99952 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.46■□□□□ 0.87
PTPN18Q99952 AC010654.1-201ENST00000615722 808 ntBASIC20.46■□□□□ 0.87
PTPN18Q99952 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PTPN18Q99952 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PTPN18Q99952 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.46■□□□□ 0.87
PTPN18Q99952 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN18Q99952 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN18Q99952 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN18Q99952 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.46■□□□□ 0.87
PTPN18Q99952 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PTPN18Q99952 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
PTPN18Q99952 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.45■□□□□ 0.86
PTPN18Q99952 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPN18Q99952 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.45■□□□□ 0.86
PTPN18Q99952 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPN18Q99952 AL513210.1-201ENST00000629608 234 ntBASIC20.45■□□□□ 0.86
PTPN18Q99952 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN18Q99952 AC025580.3-201ENST00000617932 1424 ntBASIC20.44■□□□□ 0.86
PTPN18Q99952 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN18Q99952 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms