Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
ARID3AQ99856 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ARID3AQ99856 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ARID3AQ99856 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ARID3AQ99856 AC022211.2-201ENST00000585075 2527 ntBASIC20.47■□□□□ 0.87
ARID3AQ99856 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ARID3AQ99856 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ARID3AQ99856 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.46■□□□□ 0.87
ARID3AQ99856 AC012317.2-201ENST00000623305 2251 ntBASIC20.46■□□□□ 0.87
ARID3AQ99856 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.46■□□□□ 0.87
ARID3AQ99856 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.46■□□□□ 0.87
ARID3AQ99856 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 AP003071.4-201ENST00000562276 1284 ntBASIC20.46■□□□□ 0.87
ARID3AQ99856 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.46■□□□□ 0.87
ARID3AQ99856 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.46■□□□□ 0.87
ARID3AQ99856 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.46■□□□□ 0.87
ARID3AQ99856 NKILA-202ENST00000614771 2598 ntBASIC20.46■□□□□ 0.87
ARID3AQ99856 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ARID3AQ99856 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.46■□□□□ 0.87
ARID3AQ99856 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
ARID3AQ99856 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.46■□□□□ 0.87
ARID3AQ99856 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARID3AQ99856 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
ARID3AQ99856 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 FSCN1P1-201ENST00000568912 1481 ntBASIC20.45■□□□□ 0.86
ARID3AQ99856 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 FEM1AP3-201ENST00000403722 1741 ntBASIC20.45■□□□□ 0.86
ARID3AQ99856 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.45■□□□□ 0.86
ARID3AQ99856 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ARID3AQ99856 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.45■□□□□ 0.86
ARID3AQ99856 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
ARID3AQ99856 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ARID3AQ99856 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
ARID3AQ99856 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.45■□□□□ 0.86
ARID3AQ99856 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.45■□□□□ 0.86
ARID3AQ99856 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ARID3AQ99856 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARID3AQ99856 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
ARID3AQ99856 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ARID3AQ99856 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
ARID3AQ99856 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 AL355355.2-201ENST00000442321 338 ntBASIC20.44■□□□□ 0.86
ARID3AQ99856 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.44■□□□□ 0.86
ARID3AQ99856 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.44■□□□□ 0.86
ARID3AQ99856 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.44■□□□□ 0.86
ARID3AQ99856 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.44■□□□□ 0.86
ARID3AQ99856 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.44■□□□□ 0.86
ARID3AQ99856 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 SIRPAP1-201ENST00000448467 1770 ntBASIC20.44■□□□□ 0.86
ARID3AQ99856 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ARID3AQ99856 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARID3AQ99856 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ARID3AQ99856 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARID3AQ99856 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARID3AQ99856 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARID3AQ99856 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.43■□□□□ 0.86
ARID3AQ99856 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms