Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC087641.1-201ENST00000557561 1021 ntBASIC23.72■■□□□ 1.39
ABCA3Q99758 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC23.72■■□□□ 1.39
ABCA3Q99758 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.72■■□□□ 1.39
ABCA3Q99758 AC105339.1-204ENST00000636249 355 ntBASIC23.72■■□□□ 1.39
ABCA3Q99758 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.72■■□□□ 1.39
ABCA3Q99758 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.71■■□□□ 1.39
ABCA3Q99758 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
ABCA3Q99758 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 FAM86GP-201ENST00000448322 971 ntBASIC23.71■■□□□ 1.39
ABCA3Q99758 AQP6-203ENST00000551733 849 ntTSL 3 BASIC23.71■■□□□ 1.39
ABCA3Q99758 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC23.71■■□□□ 1.39
ABCA3Q99758 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC23.71■■□□□ 1.39
ABCA3Q99758 YTHDF3-AS1-201ENST00000603538 718 ntBASIC23.71■■□□□ 1.39
ABCA3Q99758 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
ABCA3Q99758 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
ABCA3Q99758 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.71■■□□□ 1.39
ABCA3Q99758 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
ABCA3Q99758 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.71■■□□□ 1.39
ABCA3Q99758 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
ABCA3Q99758 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
ABCA3Q99758 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ABCA3Q99758 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ABCA3Q99758 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC23.7■■□□□ 1.39
ABCA3Q99758 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC23.7■■□□□ 1.39
ABCA3Q99758 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.39
ABCA3Q99758 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC23.7■■□□□ 1.39
ABCA3Q99758 AC015911.4-201ENST00000588022 1070 ntBASIC23.7■■□□□ 1.39
ABCA3Q99758 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
ABCA3Q99758 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.39
ABCA3Q99758 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ABCA3Q99758 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ABCA3Q99758 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC23.7■■□□□ 1.38
ABCA3Q99758 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.7■■□□□ 1.38
ABCA3Q99758 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC23.7■■□□□ 1.38
ABCA3Q99758 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
ABCA3Q99758 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
ABCA3Q99758 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ABCA3Q99758 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC23.7■■□□□ 1.38
ABCA3Q99758 AC069262.1-201ENST00000539058 672 ntBASIC23.7■■□□□ 1.38
ABCA3Q99758 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC23.7■■□□□ 1.38
ABCA3Q99758 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ABCA3Q99758 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC23.7■■□□□ 1.38
ABCA3Q99758 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ABCA3Q99758 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ABCA3Q99758 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
ABCA3Q99758 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
ABCA3Q99758 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ABCA3Q99758 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
ABCA3Q99758 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
ABCA3Q99758 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
ABCA3Q99758 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC23.69■■□□□ 1.38
ABCA3Q99758 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ABCA3Q99758 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC23.69■■□□□ 1.38
ABCA3Q99758 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC23.69■■□□□ 1.38
ABCA3Q99758 PUDP-206ENST00000540122 825 ntTSL 2 BASIC23.69■■□□□ 1.38
ABCA3Q99758 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC23.69■■□□□ 1.38
ABCA3Q99758 INO80C-206ENST00000586489 594 ntTSL 3 BASIC23.69■■□□□ 1.38
ABCA3Q99758 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC23.69■■□□□ 1.38
ABCA3Q99758 AC004835.2-201ENST00000603762 682 ntBASIC23.69■■□□□ 1.38
ABCA3Q99758 AC025580.3-201ENST00000617932 1424 ntBASIC23.69■■□□□ 1.38
ABCA3Q99758 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ABCA3Q99758 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ABCA3Q99758 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ABCA3Q99758 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
ABCA3Q99758 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
ABCA3Q99758 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ABCA3Q99758 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ABCA3Q99758 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.68■■□□□ 1.38
ABCA3Q99758 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ABCA3Q99758 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
ABCA3Q99758 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ABCA3Q99758 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ABCA3Q99758 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
ABCA3Q99758 AC007274.1-201ENST00000439805 662 ntBASIC23.68■■□□□ 1.38
ABCA3Q99758 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.68■■□□□ 1.38
ABCA3Q99758 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC23.68■■□□□ 1.38
ABCA3Q99758 AL353135.1-201ENST00000606729 504 ntBASIC23.68■■□□□ 1.38
ABCA3Q99758 AC012645.4-201ENST00000610691 1061 ntBASIC23.68■■□□□ 1.38
ABCA3Q99758 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms