Protein–RNA interactions for Protein: Q96RJ6

FERD3L, Fer3-like protein, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FERD3LQ96RJ6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 MTCL1P1-201ENST00000446207 792 ntBASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 VENTXP7-201ENST00000475503 772 ntBASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 KRT18P56-201ENST00000507275 550 ntBASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.54■□□□□ 0.4
FERD3LQ96RJ6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FERD3LQ96RJ6 AC022898.2-201ENST00000616822 1312 ntBASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 Z69720.1-201ENST00000601483 472 ntBASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.52■□□□□ 0.4
FERD3LQ96RJ6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
FERD3LQ96RJ6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FERD3LQ96RJ6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FERD3LQ96RJ6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FERD3LQ96RJ6 AC233702.3-201ENST00000578656 1387 ntBASIC17.52■□□□□ 0.39
FERD3LQ96RJ6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms