Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 AL596275.1-201ENST00000423464 877 ntBASIC13.28□□□□□ -0.28
ODF3Q96PU9 LIN28AP1-201ENST00000429574 405 ntBASIC13.28□□□□□ -0.28
ODF3Q96PU9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 RASA4DP-201ENST00000460726 1199 ntBASIC13.28□□□□□ -0.28
ODF3Q96PU9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 AC140113.3-201ENST00000605663 199 ntBASIC13.28□□□□□ -0.28
ODF3Q96PU9 LINC01451-201ENST00000623792 534 ntBASIC13.28□□□□□ -0.28
ODF3Q96PU9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ODF3Q96PU9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ODF3Q96PU9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.27□□□□□ -0.28
ODF3Q96PU9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.27□□□□□ -0.28
ODF3Q96PU9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ODF3Q96PU9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.27□□□□□ -0.28
ODF3Q96PU9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ODF3Q96PU9 LINC00602-201ENST00000629776 2065 ntBASIC13.27□□□□□ -0.28
ODF3Q96PU9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ODF3Q96PU9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 AC087499.1-201ENST00000418141 1075 ntBASIC13.27□□□□□ -0.29
ODF3Q96PU9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 ATP5G1P1-201ENST00000448724 379 ntBASIC13.27□□□□□ -0.29
ODF3Q96PU9 COX11P1-201ENST00000489116 835 ntBASIC13.27□□□□□ -0.29
ODF3Q96PU9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 AL136038.4-201ENST00000603606 1261 ntBASIC13.27□□□□□ -0.29
ODF3Q96PU9 AC009154.2-201ENST00000621177 724 ntBASIC13.27□□□□□ -0.29
ODF3Q96PU9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 AC011270.2-201ENST00000624293 2550 ntBASIC13.27□□□□□ -0.29
ODF3Q96PU9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 AC012313.1-201ENST00000593393 3059 ntBASIC13.27□□□□□ -0.29
ODF3Q96PU9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ODF3Q96PU9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.27□□□□□ -0.29
ODF3Q96PU9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
ODF3Q96PU9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ODF3Q96PU9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms