Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 NUS1P2-201ENST00000417358 873 ntBASIC23.98■■□□□ 1.43
CFAP53Q96M91 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.98■■□□□ 1.43
CFAP53Q96M91 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFAP53Q96M91 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.97■■□□□ 1.43
CFAP53Q96M91 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CFAP53Q96M91 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFAP53Q96M91 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFAP53Q96M91 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CFAP53Q96M91 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CFAP53Q96M91 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
CFAP53Q96M91 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CFAP53Q96M91 TSPY19P-201ENST00000418461 509 ntBASIC23.97■■□□□ 1.43
CFAP53Q96M91 TSPY18P-201ENST00000441642 509 ntBASIC23.97■■□□□ 1.43
CFAP53Q96M91 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CFAP53Q96M91 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CFAP53Q96M91 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC23.97■■□□□ 1.43
CFAP53Q96M91 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.97■■□□□ 1.43
CFAP53Q96M91 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.97■■□□□ 1.43
CFAP53Q96M91 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC23.97■■□□□ 1.43
CFAP53Q96M91 MNT-208ENST00000575394 606 ntTSL 4 BASIC23.97■■□□□ 1.43
CFAP53Q96M91 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.97■■□□□ 1.43
CFAP53Q96M91 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFAP53Q96M91 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFAP53Q96M91 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CFAP53Q96M91 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFAP53Q96M91 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC23.96■■□□□ 1.43
CFAP53Q96M91 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.96■■□□□ 1.43
CFAP53Q96M91 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
CFAP53Q96M91 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC23.96■■□□□ 1.43
CFAP53Q96M91 TP73-AS1-210ENST00000637775 1455 ntBASIC23.96■■□□□ 1.43
CFAP53Q96M91 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC23.96■■□□□ 1.43
CFAP53Q96M91 AC097374.2-201ENST00000618617 1306 ntBASIC23.96■■□□□ 1.43
CFAP53Q96M91 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 AL450487.1-201ENST00000426799 995 ntBASIC23.96■■□□□ 1.43
CFAP53Q96M91 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC23.96■■□□□ 1.43
CFAP53Q96M91 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
CFAP53Q96M91 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.96■■□□□ 1.43
CFAP53Q96M91 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.96■■□□□ 1.43
CFAP53Q96M91 AC116407.2-201ENST00000613639 860 ntBASIC23.96■■□□□ 1.43
CFAP53Q96M91 AC114341.1-201ENST00000618070 349 ntBASIC23.96■■□□□ 1.43
CFAP53Q96M91 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC23.96■■□□□ 1.43
CFAP53Q96M91 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC23.96■■□□□ 1.43
CFAP53Q96M91 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CFAP53Q96M91 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
CFAP53Q96M91 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.95■■□□□ 1.43
CFAP53Q96M91 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.43
CFAP53Q96M91 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CFAP53Q96M91 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC23.95■■□□□ 1.43
CFAP53Q96M91 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC23.95■■□□□ 1.42
CFAP53Q96M91 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CFAP53Q96M91 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC23.95■■□□□ 1.42
CFAP53Q96M91 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CFAP53Q96M91 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC23.95■■□□□ 1.42
CFAP53Q96M91 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC23.95■■□□□ 1.42
CFAP53Q96M91 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
CFAP53Q96M91 AC096633.1-201ENST00000422446 749 ntBASIC23.95■■□□□ 1.42
CFAP53Q96M91 KRT16P4-201ENST00000453883 522 ntBASIC23.95■■□□□ 1.42
CFAP53Q96M91 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC23.95■■□□□ 1.42
CFAP53Q96M91 KRT18P31-201ENST00000506277 1292 ntBASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms