Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ITCHQ96J02 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.14■□□□□ 0.33
ITCHQ96J02 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.13■□□□□ 0.33
ITCHQ96J02 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
ITCHQ96J02 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ITCHQ96J02 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.13■□□□□ 0.33
ITCHQ96J02 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.13■□□□□ 0.33
ITCHQ96J02 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ITCHQ96J02 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ITCHQ96J02 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ITCHQ96J02 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.13■□□□□ 0.33
ITCHQ96J02 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 AC007663.1-201ENST00000438948 1240 ntBASIC17.13■□□□□ 0.33
ITCHQ96J02 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.13■□□□□ 0.33
ITCHQ96J02 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.13■□□□□ 0.33
ITCHQ96J02 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.13■□□□□ 0.33
ITCHQ96J02 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.13■□□□□ 0.33
ITCHQ96J02 Z99916.2-201ENST00000604037 246 ntBASIC17.13■□□□□ 0.33
ITCHQ96J02 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
ITCHQ96J02 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
ITCHQ96J02 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITCHQ96J02 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ITCHQ96J02 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.13■□□□□ 0.33
ITCHQ96J02 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.13■□□□□ 0.33
ITCHQ96J02 AC141586.5-201ENST00000624546 2050 ntBASIC17.12■□□□□ 0.33
ITCHQ96J02 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
ITCHQ96J02 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.12■□□□□ 0.33
ITCHQ96J02 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ITCHQ96J02 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ITCHQ96J02 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ITCHQ96J02 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.12■□□□□ 0.33
ITCHQ96J02 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.12■□□□□ 0.33
ITCHQ96J02 FITM1-202ENST00000559294 800 ntBASIC17.12■□□□□ 0.33
ITCHQ96J02 C2orf69P3-201ENST00000565542 1120 ntBASIC17.12■□□□□ 0.33
ITCHQ96J02 AC008687.5-201ENST00000593746 558 ntBASIC17.12■□□□□ 0.33
ITCHQ96J02 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.12■□□□□ 0.33
ITCHQ96J02 AP000525.1-201ENST00000608286 694 ntBASIC17.12■□□□□ 0.33
ITCHQ96J02 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.12■□□□□ 0.33
ITCHQ96J02 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ITCHQ96J02 AC022898.2-201ENST00000616822 1312 ntBASIC17.12■□□□□ 0.33
ITCHQ96J02 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.12■□□□□ 0.33
ITCHQ96J02 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ITCHQ96J02 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.12■□□□□ 0.33
ITCHQ96J02 AC108860.2-201ENST00000562760 2183 ntBASIC17.12■□□□□ 0.33
ITCHQ96J02 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.12■□□□□ 0.33
ITCHQ96J02 PP12613-201ENST00000424958 2230 ntBASIC17.12■□□□□ 0.33
ITCHQ96J02 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITCHQ96J02 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 AL023806.1-201ENST00000603994 1649 ntBASIC17.11■□□□□ 0.33
ITCHQ96J02 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
ITCHQ96J02 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.11■□□□□ 0.33
ITCHQ96J02 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.11■□□□□ 0.33
ITCHQ96J02 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.11■□□□□ 0.33
ITCHQ96J02 MIR4785-201ENST00000585005 73 ntBASIC17.11■□□□□ 0.33
ITCHQ96J02 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITCHQ96J02 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms