Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 LINC01126-201ENST00000623515 1646 ntBASIC21.35■■□□□ 1.01
DDX11Q96FC9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX11Q96FC9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX11Q96FC9 AC138028.4-201ENST00000564984 1845 ntBASIC21.34■■□□□ 1.01
DDX11Q96FC9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX11Q96FC9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX11Q96FC9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX11Q96FC9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX11Q96FC9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX11Q96FC9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX11Q96FC9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX11Q96FC9 MIR662-201ENST00000384847 95 ntBASIC21.34■■□□□ 1.01
DDX11Q96FC9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX11Q96FC9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX11Q96FC9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
DDX11Q96FC9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX11Q96FC9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX11Q96FC9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX11Q96FC9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX11Q96FC9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX11Q96FC9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX11Q96FC9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX11Q96FC9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX11Q96FC9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX11Q96FC9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX11Q96FC9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DDX11Q96FC9 TSPY22P-201ENST00000427496 604 ntBASIC21.33■■□□□ 1.01
DDX11Q96FC9 AP002383.4-201ENST00000442518 975 ntBASIC21.33■■□□□ 1.01
DDX11Q96FC9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DDX11Q96FC9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.33■■□□□ 1.01
DDX11Q96FC9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX11Q96FC9 MIR3180-1-201ENST00000580374 94 ntBASIC21.33■■□□□ 1.01
DDX11Q96FC9 MIR3180-3-201ENST00000584616 94 ntBASIC21.33■■□□□ 1.01
DDX11Q96FC9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX11Q96FC9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.33■■□□□ 1.01
DDX11Q96FC9 AC010240.3-201ENST00000607688 395 ntBASIC21.33■■□□□ 1.01
DDX11Q96FC9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX11Q96FC9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DDX11Q96FC9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
DDX11Q96FC9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.33■■□□□ 1
DDX11Q96FC9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.33■■□□□ 1
DDX11Q96FC9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DDX11Q96FC9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DDX11Q96FC9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
DDX11Q96FC9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.32■■□□□ 1
DDX11Q96FC9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
DDX11Q96FC9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
DDX11Q96FC9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
DDX11Q96FC9 CHCHD2P8-201ENST00000429873 447 ntBASIC21.32■■□□□ 1
DDX11Q96FC9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.32■■□□□ 1
DDX11Q96FC9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
DDX11Q96FC9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
DDX11Q96FC9 AP002414.4-201ENST00000589764 1148 ntBASIC21.32■■□□□ 1
DDX11Q96FC9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.32■■□□□ 1
DDX11Q96FC9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX11Q96FC9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.31■■□□□ 1
DDX11Q96FC9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 AP000997.3-201ENST00000623333 2250 ntBASIC21.31■■□□□ 1
DDX11Q96FC9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.31■■□□□ 1
DDX11Q96FC9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms