Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC012306.2-201ENST00000609350 630 ntBASIC19.02■□□□□ 0.64
TRIM11Q96F44 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM11Q96F44 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM11Q96F44 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM11Q96F44 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM11Q96F44 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
TRIM11Q96F44 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
TRIM11Q96F44 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM11Q96F44 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 STARP1-201ENST00000397973 869 ntBASIC19.01■□□□□ 0.63
TRIM11Q96F44 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 FAM8A6P-201ENST00000407496 1135 ntBASIC19.01■□□□□ 0.63
TRIM11Q96F44 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.01■□□□□ 0.63
TRIM11Q96F44 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM11Q96F44 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 AC100803.2-201ENST00000562459 1963 ntBASIC19.01■□□□□ 0.63
TRIM11Q96F44 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM11Q96F44 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19■□□□□ 0.63
TRIM11Q96F44 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19■□□□□ 0.63
TRIM11Q96F44 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19■□□□□ 0.63
TRIM11Q96F44 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRIM11Q96F44 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM11Q96F44 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19■□□□□ 0.63
TRIM11Q96F44 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM11Q96F44 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM11Q96F44 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRIM11Q96F44 KRT18P48-201ENST00000434763 852 ntBASIC19■□□□□ 0.63
TRIM11Q96F44 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM11Q96F44 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19■□□□□ 0.63
TRIM11Q96F44 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19■□□□□ 0.63
TRIM11Q96F44 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM11Q96F44 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
TRIM11Q96F44 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM11Q96F44 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM11Q96F44 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM11Q96F44 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM11Q96F44 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM11Q96F44 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM11Q96F44 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM11Q96F44 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM11Q96F44 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19■□□□□ 0.63
TRIM11Q96F44 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM11Q96F44 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 TERF1P1-201ENST00000311003 1181 ntBASIC18.99■□□□□ 0.63
TRIM11Q96F44 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 HLA-F-220ENST00000434407 884 ntBASIC18.99■□□□□ 0.63
TRIM11Q96F44 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.99■□□□□ 0.63
TRIM11Q96F44 AC079602.3-201ENST00000623931 403 ntBASIC18.99■□□□□ 0.63
TRIM11Q96F44 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM11Q96F44 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms