Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 KRT16P5-201ENST00000455284 522 ntBASIC17.77■□□□□ 0.44
SPDL1Q96EA4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 AC069544.1-201ENST00000609399 999 ntBASIC17.77■□□□□ 0.44
SPDL1Q96EA4 AL445675.2-201ENST00000620291 557 ntBASIC17.77■□□□□ 0.44
SPDL1Q96EA4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPDL1Q96EA4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPDL1Q96EA4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.77■□□□□ 0.43
SPDL1Q96EA4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
SPDL1Q96EA4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.77■□□□□ 0.43
SPDL1Q96EA4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPDL1Q96EA4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPDL1Q96EA4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPDL1Q96EA4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.77■□□□□ 0.43
SPDL1Q96EA4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
SPDL1Q96EA4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 KRT17P3-201ENST00000420566 1262 ntBASIC17.76■□□□□ 0.43
SPDL1Q96EA4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.76■□□□□ 0.43
SPDL1Q96EA4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 AC131212.4-201ENST00000623606 975 ntBASIC17.76■□□□□ 0.43
SPDL1Q96EA4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPDL1Q96EA4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 MYLKP1-201ENST00000509077 1580 ntBASIC17.75■□□□□ 0.43
SPDL1Q96EA4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 KRASP1-201ENST00000407852 552 ntBASIC17.75■□□□□ 0.43
SPDL1Q96EA4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 RCC2P3-201ENST00000418112 1537 ntBASIC17.75■□□□□ 0.43
SPDL1Q96EA4 DOC2GP-204ENST00000639052 2548 ntBASIC17.75■□□□□ 0.43
SPDL1Q96EA4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPDL1Q96EA4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPDL1Q96EA4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPDL1Q96EA4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SPDL1Q96EA4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms