Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 AP003041.3-201ENST00000527151 707 ntBASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 NAPSB-206ENST00000562112 1266 ntBASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 AC092338.2-201ENST00000568827 1415 ntBASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RTN4IP1Q8WWV3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 TSPY14P-201ENST00000303979 915 ntBASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 EGLN1P1-201ENST00000531623 762 ntBASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 BX088651.1-201ENST00000540551 451 ntBASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTN4IP1Q8WWV3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 AD000864.1-201ENST00000624076 2295 ntBASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 KRT8P9-201ENST00000558927 1449 ntBASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 MIR4674-201ENST00000582457 87 ntBASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 MIR3180-5-201ENST00000583743 153 ntBASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTN4IP1Q8WWV3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms