Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 RNA5SP416-201ENST00000516838 111 ntBASIC30.66■■■□□ 2.5
TRIM41Q8WV44 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC30.65■■■□□ 2.5
TRIM41Q8WV44 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TRIM41Q8WV44 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
TRIM41Q8WV44 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TRIM41Q8WV44 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC30.64■■■□□ 2.5
TRIM41Q8WV44 AC254562.1-201ENST00000417586 456 ntBASIC30.64■■■□□ 2.5
TRIM41Q8WV44 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC30.64■■■□□ 2.5
TRIM41Q8WV44 AC005225.4-201ENST00000557330 545 ntBASIC30.64■■■□□ 2.5
TRIM41Q8WV44 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC30.64■■■□□ 2.5
TRIM41Q8WV44 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TRIM41Q8WV44 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
TRIM41Q8WV44 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TRIM41Q8WV44 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TRIM41Q8WV44 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
TRIM41Q8WV44 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.49
TRIM41Q8WV44 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 DDT-206ENST00000430101 573 ntTSL 2 BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 AC009533.2-201ENST00000543664 586 ntBASIC30.63■■■□□ 2.49
TRIM41Q8WV44 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
TRIM41Q8WV44 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRIM41Q8WV44 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 AL138781.2-201ENST00000617896 1843 ntBASIC30.61■■■□□ 2.49
TRIM41Q8WV44 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 CNN2P11-201ENST00000429351 262 ntBASIC30.61■■■□□ 2.49
TRIM41Q8WV44 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 AL591684.3-201ENST00000605187 298 ntBASIC30.61■■■□□ 2.49
TRIM41Q8WV44 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM41Q8WV44 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC30.6■■■□□ 2.49
TRIM41Q8WV44 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
TRIM41Q8WV44 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TRIM41Q8WV44 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TRIM41Q8WV44 AC007967.2-201ENST00000432613 625 ntBASIC30.6■■■□□ 2.49
TRIM41Q8WV44 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC30.6■■■□□ 2.49
TRIM41Q8WV44 AC068472.1-201ENST00000474589 881 ntBASIC30.6■■■□□ 2.49
TRIM41Q8WV44 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC30.6■■■□□ 2.49
TRIM41Q8WV44 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC30.6■■■□□ 2.49
TRIM41Q8WV44 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
TRIM41Q8WV44 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TRIM41Q8WV44 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms