Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBA3Q8TBC4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 AL133373.2-201ENST00000623187 2828 ntBASIC19.03■□□□□ 0.64
UBA3Q8TBC4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 CHCHD2P8-201ENST00000429873 447 ntBASIC19.03■□□□□ 0.64
UBA3Q8TBC4 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 AP002383.4-201ENST00000442518 975 ntBASIC19.03■□□□□ 0.64
UBA3Q8TBC4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 AC069148.1-201ENST00000608741 768 ntBASIC19.03■□□□□ 0.64
UBA3Q8TBC4 AL592071.1-201ENST00000611956 408 ntBASIC19.03■□□□□ 0.64
UBA3Q8TBC4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBA3Q8TBC4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 MTCL1P1-201ENST00000446207 792 ntBASIC19.02■□□□□ 0.64
UBA3Q8TBC4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 AC090616.6-201ENST00000582640 721 ntBASIC19.02■□□□□ 0.64
UBA3Q8TBC4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
UBA3Q8TBC4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UBA3Q8TBC4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBA3Q8TBC4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UBA3Q8TBC4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBA3Q8TBC4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.02■□□□□ 0.63
UBA3Q8TBC4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBA3Q8TBC4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBA3Q8TBC4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 KRT18P1-202ENST00000452408 1331 ntBASIC19.01■□□□□ 0.63
UBA3Q8TBC4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 AC112698.1-201ENST00000510299 916 ntBASIC19.01■□□□□ 0.63
UBA3Q8TBC4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.01■□□□□ 0.63
UBA3Q8TBC4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBA3Q8TBC4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UBA3Q8TBC4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms