Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 AL031284.1-201ENST00000419297 478 ntBASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 AC009533.2-201ENST00000543664 586 ntBASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 AC023511.2-201ENST00000618803 211 ntBASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 AL355877.3-201ENST00000622820 899 ntBASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 AC135050.7-201ENST00000624508 2218 ntBASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHKBP1Q8TBC3 AC125634.1-201ENST00000438758 1403 ntBASIC18.83■□□□□ 0.61
SHKBP1Q8TBC3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.83■□□□□ 0.61
SHKBP1Q8TBC3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHKBP1Q8TBC3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHKBP1Q8TBC3 IL9RP2-201ENST00000423948 1312 ntBASIC18.83■□□□□ 0.61
SHKBP1Q8TBC3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.83■□□□□ 0.61
SHKBP1Q8TBC3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 KRT18P65-201ENST00000439811 1286 ntBASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 FGFR3P6-201ENST00000457012 610 ntBASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 AF186996.4-201ENST00000467186 377 ntBASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 AP001269.4-201ENST00000609611 512 ntBASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 ANO7L1-203ENST00000602586 1720 ntBASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHKBP1Q8TBC3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 INTS4P1-201ENST00000438455 1935 ntBASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 AC018712.1-201ENST00000455767 687 ntBASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 AC011467.2-201ENST00000598425 242 ntBASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms