Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH19Q8TAB3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 AP003733.1-201ENST00000491725 852 ntBASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 ZNF444P1-201ENST00000559497 298 ntBASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH19Q8TAB3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 UPK3BP1-201ENST00000428678 509 ntBASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH19Q8TAB3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 RNF126P1-202ENST00000569893 925 ntBASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH19Q8TAB3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms