Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 AC004951.3-201ENST00000418645 1148 ntBASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 C1QBPP2-201ENST00000528754 825 ntBASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 AC034236.2-201ENST00000606662 1610 ntBASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFWD2Q8NHY2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 KRT18P29-201ENST00000397031 1267 ntBASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 AL023284.2-201ENST00000405850 579 ntBASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 KRT16P5-201ENST00000455284 522 ntBASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 LINC01126-201ENST00000623515 1646 ntBASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.78■□□□□ 0.44
RFWD2Q8NHY2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 AC133963.1-201ENST00000504166 1679 ntBASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 AC009102.3-201ENST00000623118 1491 ntBASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 RN7SL471P-201ENST00000580476 299 ntBASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFWD2Q8NHY2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFWD2Q8NHY2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFWD2Q8NHY2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.77■□□□□ 0.43
RFWD2Q8NHY2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
RFWD2Q8NHY2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFWD2Q8NHY2 AL163051.1-201ENST00000569214 1512 ntBASIC17.77■□□□□ 0.43
RFWD2Q8NHY2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
RFWD2Q8NHY2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
RFWD2Q8NHY2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 PCDHB19P-201ENST00000570871 2371 ntBASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms