Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TP73-AS1-210ENST00000637775 1455 ntBASIC19.29■□□□□ 0.68
BEST2Q8NFU1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST2Q8NFU1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.28■□□□□ 0.68
BEST2Q8NFU1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
BEST2Q8NFU1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 MIR5100-201ENST00000579544 119 ntBASIC19.27■□□□□ 0.68
BEST2Q8NFU1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 AL591684.3-201ENST00000605187 298 ntBASIC19.27■□□□□ 0.68
BEST2Q8NFU1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 KRT8P47-201ENST00000604727 1398 ntBASIC19.27■□□□□ 0.68
BEST2Q8NFU1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BEST2Q8NFU1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
BEST2Q8NFU1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
BEST2Q8NFU1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
BEST2Q8NFU1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
BEST2Q8NFU1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BEST2Q8NFU1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BEST2Q8NFU1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BEST2Q8NFU1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
BEST2Q8NFU1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BEST2Q8NFU1 AC097374.2-201ENST00000618617 1306 ntBASIC19.26■□□□□ 0.67
BEST2Q8NFU1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.26■□□□□ 0.67
BEST2Q8NFU1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.26■□□□□ 0.67
BEST2Q8NFU1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST2Q8NFU1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST2Q8NFU1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
BEST2Q8NFU1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BEST2Q8NFU1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST2Q8NFU1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms