Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC197Q8NCU1 PCDHB17P-201ENST00000539533 2393 ntBASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 PRSS44-201ENST00000515154 1146 ntBASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 AL139246.5-201ENST00000606645 996 ntBASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC197Q8NCU1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 AC026691.1-201ENST00000602502 2017 ntBASIC17.83■□□□□ 0.45
CCDC197Q8NCU1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 LINC00304-203ENST00000565008 1864 ntBASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC197Q8NCU1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC197Q8NCU1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms