Protein–RNA interactions for Protein: Q8N9B4

ANKRD42, Ankyrin repeat domain-containing protein 42, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42Q8N9B4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 AL139384.1-201ENST00000612143 3047 ntBASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ANKRD42Q8N9B4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 AC009102.3-201ENST00000623118 1491 ntBASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 AL023875.1-201ENST00000640777 796 ntBASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ANKRD42Q8N9B4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
ANKRD42Q8N9B4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
ANKRD42Q8N9B4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.14■□□□□ 0.5
ANKRD42Q8N9B4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 AL138688.1-201ENST00000624851 1594 ntBASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 AL023284.2-201ENST00000405850 579 ntBASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 MCCD1P1-208ENST00000445732 328 ntBASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 AC011298.2-201ENST00000617989 482 ntBASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.14■□□□□ 0.49
ANKRD42Q8N9B4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.13■□□□□ 0.49
ANKRD42Q8N9B4 AC008403.3-201ENST00000598924 454 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms