Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
NME8Q8N427 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NME8Q8N427 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.76■□□□□ 0.75
NME8Q8N427 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NME8Q8N427 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NME8Q8N427 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NME8Q8N427 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NME8Q8N427 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NME8Q8N427 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
NME8Q8N427 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NME8Q8N427 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.75■□□□□ 0.75
NME8Q8N427 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.75■□□□□ 0.75
NME8Q8N427 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NME8Q8N427 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
NME8Q8N427 RPS2P28-201ENST00000314255 741 ntBASIC19.75■□□□□ 0.75
NME8Q8N427 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.75■□□□□ 0.75
NME8Q8N427 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NME8Q8N427 AC018712.1-201ENST00000455767 687 ntBASIC19.75■□□□□ 0.75
NME8Q8N427 AC073648.2-201ENST00000510116 352 ntBASIC19.75■□□□□ 0.75
NME8Q8N427 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
NME8Q8N427 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.75■□□□□ 0.75
NME8Q8N427 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.75■□□□□ 0.75
NME8Q8N427 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.75■□□□□ 0.75
NME8Q8N427 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NME8Q8N427 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.75■□□□□ 0.75
NME8Q8N427 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NME8Q8N427 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NME8Q8N427 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NME8Q8N427 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NME8Q8N427 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.75■□□□□ 0.75
NME8Q8N427 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NME8Q8N427 AC132938.6-201ENST00000623828 1655 ntBASIC19.75■□□□□ 0.75
NME8Q8N427 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.74■□□□□ 0.75
NME8Q8N427 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.74■□□□□ 0.75
NME8Q8N427 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
NME8Q8N427 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NME8Q8N427 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.74■□□□□ 0.75
NME8Q8N427 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.74■□□□□ 0.75
NME8Q8N427 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.74■□□□□ 0.75
NME8Q8N427 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.74■□□□□ 0.75
NME8Q8N427 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.74■□□□□ 0.75
NME8Q8N427 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.74■□□□□ 0.75
NME8Q8N427 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.74■□□□□ 0.75
NME8Q8N427 AC120114.3-201ENST00000611923 658 ntBASIC19.74■□□□□ 0.75
NME8Q8N427 AC148477.8-201ENST00000624298 468 ntBASIC19.74■□□□□ 0.75
NME8Q8N427 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.74■□□□□ 0.75
NME8Q8N427 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NME8Q8N427 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.74■□□□□ 0.75
NME8Q8N427 IL9RP2-201ENST00000423948 1312 ntBASIC19.74■□□□□ 0.75
NME8Q8N427 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NME8Q8N427 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.73■□□□□ 0.75
NME8Q8N427 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.73■□□□□ 0.75
NME8Q8N427 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NME8Q8N427 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.73■□□□□ 0.75
NME8Q8N427 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.73■□□□□ 0.75
NME8Q8N427 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.73■□□□□ 0.75
NME8Q8N427 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.73■□□□□ 0.75
NME8Q8N427 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.73■□□□□ 0.75
NME8Q8N427 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.73■□□□□ 0.75
NME8Q8N427 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 AC073592.3-201ENST00000625118 1834 ntBASIC19.73■□□□□ 0.75
NME8Q8N427 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.73■□□□□ 0.75
NME8Q8N427 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NME8Q8N427 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NME8Q8N427 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NME8Q8N427 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NME8Q8N427 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.72■□□□□ 0.75
NME8Q8N427 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NME8Q8N427 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NME8Q8N427 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NME8Q8N427 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.72■□□□□ 0.75
NME8Q8N427 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NME8Q8N427 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms