Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 RPSAP43-201ENST00000402237 625 ntBASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 AC112698.1-201ENST00000510299 916 ntBASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 AC012640.2-201ENST00000561606 901 ntBASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 NKAPP1-205ENST00000585790 367 ntBASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 MTDHP4-201ENST00000600287 670 ntBASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 AP000867.4-201ENST00000641616 219 ntBASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 AC097374.2-201ENST00000618617 1306 ntBASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 AL049812.1-201ENST00000432563 2267 ntBASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 LAGE3P1-201ENST00000425356 484 ntBASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 GPX1P2-201ENST00000429271 606 ntBASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 RNA5SP416-201ENST00000516838 111 ntBASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 AC055717.3-201ENST00000622967 595 ntBASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SYNPOQ8N3V7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYNPOQ8N3V7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 YBX2P1-201ENST00000394192 760 ntBASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 UNC93B6-202ENST00000528242 690 ntBASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms