Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.36■□□□□ 0.53
SIX5Q8N196 FAM8A3P-201ENST00000427218 844 ntBASIC18.36■□□□□ 0.53
SIX5Q8N196 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 AC108751.1-201ENST00000490852 363 ntBASIC18.36■□□□□ 0.53
SIX5Q8N196 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.36■□□□□ 0.53
SIX5Q8N196 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SIX5Q8N196 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.36■□□□□ 0.53
SIX5Q8N196 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.36■□□□□ 0.53
SIX5Q8N196 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.36■□□□□ 0.53
SIX5Q8N196 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SIX5Q8N196 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.36■□□□□ 0.53
SIX5Q8N196 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX5Q8N196 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX5Q8N196 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX5Q8N196 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX5Q8N196 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX5Q8N196 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX5Q8N196 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX5Q8N196 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
SIX5Q8N196 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SIX5Q8N196 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
SIX5Q8N196 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX5Q8N196 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX5Q8N196 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX5Q8N196 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX5Q8N196 YBX1P5-201ENST00000509441 847 ntBASIC18.35■□□□□ 0.53
SIX5Q8N196 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX5Q8N196 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SIX5Q8N196 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.35■□□□□ 0.53
SIX5Q8N196 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX5Q8N196 AP000867.4-201ENST00000641616 219 ntBASIC18.35■□□□□ 0.53
SIX5Q8N196 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX5Q8N196 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX5Q8N196 FZD10-202ENST00000539839 3282 ntBASIC18.35■□□□□ 0.53
SIX5Q8N196 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX5Q8N196 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SIX5Q8N196 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SIX5Q8N196 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX5Q8N196 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SIX5Q8N196 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SIX5Q8N196 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX5Q8N196 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX5Q8N196 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SIX5Q8N196 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.34■□□□□ 0.53
SIX5Q8N196 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.34■□□□□ 0.53
SIX5Q8N196 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
SIX5Q8N196 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SIX5Q8N196 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIX5Q8N196 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SIX5Q8N196 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.34■□□□□ 0.53
SIX5Q8N196 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.34■□□□□ 0.53
SIX5Q8N196 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX5Q8N196 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.34■□□□□ 0.53
SIX5Q8N196 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIX5Q8N196 AC254562.1-201ENST00000417586 456 ntBASIC18.34■□□□□ 0.53
SIX5Q8N196 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.34■□□□□ 0.53
SIX5Q8N196 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.34■□□□□ 0.53
SIX5Q8N196 AL645939.2-201ENST00000427340 991 ntBASIC18.34■□□□□ 0.53
SIX5Q8N196 KRT18P2-201ENST00000447938 1258 ntBASIC18.34■□□□□ 0.53
SIX5Q8N196 ALG1L5P-201ENST00000482043 771 ntBASIC18.34■□□□□ 0.53
SIX5Q8N196 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
SIX5Q8N196 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.34■□□□□ 0.53
SIX5Q8N196 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.34■□□□□ 0.53
SIX5Q8N196 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.34■□□□□ 0.53
SIX5Q8N196 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.34■□□□□ 0.53
SIX5Q8N196 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.34■□□□□ 0.53
SIX5Q8N196 PGM5P2-202ENST00000637225 1043 ntBASIC18.34■□□□□ 0.53
SIX5Q8N196 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.34■□□□□ 0.53
SIX5Q8N196 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIX5Q8N196 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SIX5Q8N196 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX5Q8N196 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.34■□□□□ 0.53
SIX5Q8N196 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SIX5Q8N196 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX5Q8N196 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIX5Q8N196 SDHAP2-201ENST00000455183 2001 ntBASIC18.33■□□□□ 0.53
SIX5Q8N196 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
SIX5Q8N196 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SIX5Q8N196 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIX5Q8N196 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIX5Q8N196 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIX5Q8N196 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SIX5Q8N196 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIX5Q8N196 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SIX5Q8N196 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIX5Q8N196 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIX5Q8N196 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.33■□□□□ 0.53
SIX5Q8N196 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIX5Q8N196 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIX5Q8N196 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SIX5Q8N196 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
SIX5Q8N196 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIX5Q8N196 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.33■□□□□ 0.52
SIX5Q8N196 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.33■□□□□ 0.52
SIX5Q8N196 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.33■□□□□ 0.52
SIX5Q8N196 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.33■□□□□ 0.52
SIX5Q8N196 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SIX5Q8N196 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms