Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.64■□□□□ 0.41
TRIM48Q8IWZ4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 RN7SL606P-201ENST00000472779 293 ntBASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM48Q8IWZ4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 KRT17P6-201ENST00000453795 1220 ntBASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 MINOS1P3-201ENST00000457048 203 ntBASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 AC073592.3-201ENST00000625118 1834 ntBASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 ESPNP-201ENST00000270691 2015 ntBASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM48Q8IWZ4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 NUS1P1-201ENST00000446295 882 ntBASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms