Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.84■□□□□ 0.45
APLFQ8IW19 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
APLFQ8IW19 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.84■□□□□ 0.45
APLFQ8IW19 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
APLFQ8IW19 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
APLFQ8IW19 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 AP000523.1-201ENST00000398242 1049 ntBASIC17.84■□□□□ 0.45
APLFQ8IW19 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.84■□□□□ 0.45
APLFQ8IW19 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.84■□□□□ 0.45
APLFQ8IW19 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 AL671277.2-201ENST00000458060 996 ntBASIC17.84■□□□□ 0.45
APLFQ8IW19 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
APLFQ8IW19 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.84■□□□□ 0.45
APLFQ8IW19 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.84■□□□□ 0.45
APLFQ8IW19 AC135776.1-201ENST00000319817 2481 ntBASIC17.84■□□□□ 0.45
APLFQ8IW19 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.84■□□□□ 0.45
APLFQ8IW19 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.84■□□□□ 0.45
APLFQ8IW19 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
APLFQ8IW19 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.84■□□□□ 0.45
APLFQ8IW19 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
APLFQ8IW19 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.84■□□□□ 0.45
APLFQ8IW19 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APLFQ8IW19 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
APLFQ8IW19 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.83■□□□□ 0.45
APLFQ8IW19 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.83■□□□□ 0.45
APLFQ8IW19 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
APLFQ8IW19 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
APLFQ8IW19 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.83■□□□□ 0.45
APLFQ8IW19 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APLFQ8IW19 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APLFQ8IW19 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
APLFQ8IW19 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APLFQ8IW19 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APLFQ8IW19 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APLFQ8IW19 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.83■□□□□ 0.44
APLFQ8IW19 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APLFQ8IW19 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APLFQ8IW19 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
APLFQ8IW19 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.83■□□□□ 0.44
APLFQ8IW19 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.83■□□□□ 0.44
APLFQ8IW19 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.83■□□□□ 0.44
APLFQ8IW19 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.83■□□□□ 0.44
APLFQ8IW19 AP003041.3-201ENST00000527151 707 ntBASIC17.83■□□□□ 0.44
APLFQ8IW19 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.83■□□□□ 0.44
APLFQ8IW19 AL441883.1-201ENST00000566170 1045 ntBASIC17.83■□□□□ 0.44
APLFQ8IW19 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
APLFQ8IW19 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.83■□□□□ 0.44
APLFQ8IW19 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APLFQ8IW19 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
APLFQ8IW19 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
APLFQ8IW19 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APLFQ8IW19 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.83■□□□□ 0.44
APLFQ8IW19 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APLFQ8IW19 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APLFQ8IW19 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
APLFQ8IW19 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.82■□□□□ 0.44
APLFQ8IW19 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
APLFQ8IW19 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.82■□□□□ 0.44
APLFQ8IW19 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 CICP6-201ENST00000457191 2729 ntBASIC17.82■□□□□ 0.44
APLFQ8IW19 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.82■□□□□ 0.44
APLFQ8IW19 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.82■□□□□ 0.44
APLFQ8IW19 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.82■□□□□ 0.44
APLFQ8IW19 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 KRT18P48-201ENST00000434763 852 ntBASIC17.82■□□□□ 0.44
APLFQ8IW19 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 AL359075.1-203ENST00000462729 1002 ntBASIC17.82■□□□□ 0.44
APLFQ8IW19 PRSS44-201ENST00000515154 1146 ntBASIC17.82■□□□□ 0.44
APLFQ8IW19 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.82■□□□□ 0.44
APLFQ8IW19 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.82■□□□□ 0.44
APLFQ8IW19 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.82■□□□□ 0.44
APLFQ8IW19 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
APLFQ8IW19 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
APLFQ8IW19 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms