Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 AC011676.5-201ENST00000624864 2660 ntBASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 AC133963.1-201ENST00000504166 1679 ntBASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 KRT8P7-201ENST00000533003 1432 ntBASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NUDCD3Q8IVD9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 AC090192.1-201ENST00000517740 490 ntBASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NUDCD3Q8IVD9 CROCCP2-202ENST00000412962 2773 ntBASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms