Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 KRT8P32-201ENST00000512863 1461 ntBASIC19.03■□□□□ 0.64
RNF135Q8IUD6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 DNAJB3-202ENST00000449667 1266 ntBASIC19.03■□□□□ 0.64
RNF135Q8IUD6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RNF135Q8IUD6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 RCN1P2-201ENST00000398357 915 ntBASIC19.02■□□□□ 0.64
RNF135Q8IUD6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF135Q8IUD6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RNF135Q8IUD6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
RNF135Q8IUD6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RNF135Q8IUD6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.02■□□□□ 0.63
RNF135Q8IUD6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
RNF135Q8IUD6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.02■□□□□ 0.63
RNF135Q8IUD6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF135Q8IUD6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
RNF135Q8IUD6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
RNF135Q8IUD6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 Z83851.2-201ENST00000609564 659 ntBASIC19.01■□□□□ 0.63
RNF135Q8IUD6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 KRT89P-201ENST00000620027 1478 ntBASIC19.01■□□□□ 0.63
RNF135Q8IUD6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF135Q8IUD6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
RNF135Q8IUD6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19■□□□□ 0.63
RNF135Q8IUD6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF135Q8IUD6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms