Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL23A1Q86Y22 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 COX5BP2-201ENST00000392354 334 ntBASIC22.4■■□□□ 1.18
COL23A1Q86Y22 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 AC022145.2-201ENST00000598203 171 ntBASIC22.4■■□□□ 1.18
COL23A1Q86Y22 LINC00628-201ENST00000628516 1289 ntBASIC22.4■■□□□ 1.18
COL23A1Q86Y22 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL23A1Q86Y22 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL23A1Q86Y22 GID4-202ENST00000376345 1391 ntTSL 3 BASIC22.39■■□□□ 1.18
COL23A1Q86Y22 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC22.39■■□□□ 1.18
COL23A1Q86Y22 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.39■■□□□ 1.18
COL23A1Q86Y22 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
COL23A1Q86Y22 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL23A1Q86Y22 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.39■■□□□ 1.17
COL23A1Q86Y22 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 AL049757.1-201ENST00000616842 1596 ntBASIC22.38■■□□□ 1.17
COL23A1Q86Y22 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 AC063926.2-201ENST00000623766 1308 ntBASIC22.38■■□□□ 1.17
COL23A1Q86Y22 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 PTCHD3P3-201ENST00000403073 906 ntBASIC22.38■■□□□ 1.17
COL23A1Q86Y22 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 AJ011932.1-201ENST00000621707 465 ntBASIC22.38■■□□□ 1.17
COL23A1Q86Y22 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL23A1Q86Y22 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 AC023141.5-201ENST00000458585 616 ntBASIC22.37■■□□□ 1.17
COL23A1Q86Y22 CCDC74BP1-201ENST00000508880 1123 ntBASIC22.37■■□□□ 1.17
COL23A1Q86Y22 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 AC007952.6-201ENST00000573168 2673 ntBASIC22.37■■□□□ 1.17
COL23A1Q86Y22 AC003957.1-201ENST00000625108 2673 ntBASIC22.37■■□□□ 1.17
COL23A1Q86Y22 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL23A1Q86Y22 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL23A1Q86Y22 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms