Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 KRT19P2-202ENST00000557173 1012 ntBASIC14.88□□□□□ -0.03
VPS13CQ709C8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 Z92544.3-201ENST00000624747 417 ntBASIC14.88□□□□□ -0.03
VPS13CQ709C8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 AC023141.5-201ENST00000458585 616 ntBASIC14.87□□□□□ -0.03
VPS13CQ709C8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
VPS13CQ709C8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS13CQ709C8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 GPR89P-201ENST00000407924 1495 ntBASIC14.86□□□□□ -0.03
VPS13CQ709C8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 AC091812.2-201ENST00000619081 385 ntBASIC14.86□□□□□ -0.03
VPS13CQ709C8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 AC018845.2-201ENST00000568326 409 ntBASIC14.86□□□□□ -0.03
VPS13CQ709C8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VPS13CQ709C8 AC132938.5-201ENST00000624980 1813 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms