Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 MMP23A-201ENST00000234610 1017 ntBASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 AL390955.1-201ENST00000428694 934 ntBASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
TMEM53Q6P2H8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 CCR12P-201ENST00000446203 998 ntBASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 AC006333.2-201ENST00000607957 2099 ntBASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 OR6D1P-202ENST00000641007 5290 ntBASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 AC008741.2-201ENST00000612792 3115 ntBASIC16.5■□□□□ 0.23
TMEM53Q6P2H8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 GNAS-203ENST00000306120 1878 ntBASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 SLC25A1P2-201ENST00000430693 912 ntBASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM53Q6P2H8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms