Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 KRT16P4-201ENST00000453883 522 ntBASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 AC138028.4-201ENST00000564984 1845 ntBASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 AC135050.7-201ENST00000624508 2218 ntBASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 KRT18P55-202ENST00000578578 1546 ntBASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC178Q5BJE1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 KRT8P47-201ENST00000604727 1398 ntBASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
CCDC178Q5BJE1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 BNIP3P18-201ENST00000593976 575 ntBASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms