Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 AC112698.1-201ENST00000510299 916 ntBASIC21.69■■□□□ 1.06
RFX7Q2KHR2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 AC100803.2-201ENST00000562459 1963 ntBASIC21.69■■□□□ 1.06
RFX7Q2KHR2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFX7Q2KHR2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 AC011840.4-201ENST00000578471 627 ntBASIC21.68■■□□□ 1.06
RFX7Q2KHR2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 AC006116.8-202ENST00000587620 1550 ntBASIC21.68■■□□□ 1.06
RFX7Q2KHR2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFX7Q2KHR2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 AC096582.2-201ENST00000510860 516 ntBASIC21.67■■□□□ 1.06
RFX7Q2KHR2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.67■■□□□ 1.06
RFX7Q2KHR2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 HLA-A-201ENST00000376802 1334 ntBASIC21.66■■□□□ 1.06
RFX7Q2KHR2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 AC068472.1-201ENST00000474589 881 ntBASIC21.66■■□□□ 1.06
RFX7Q2KHR2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 LINC01711-201ENST00000598340 967 ntBASIC21.66■■□□□ 1.06
RFX7Q2KHR2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX7Q2KHR2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX7Q2KHR2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms