Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 AC008550.1-201ENST00000511500 884 ntBASIC13.79□□□□□ -0.2
HIST1H1AQ02539 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 AP005242.2-201ENST00000580065 1175 ntBASIC13.79□□□□□ -0.2
HIST1H1AQ02539 MIR4785-201ENST00000585005 73 ntBASIC13.79□□□□□ -0.2
HIST1H1AQ02539 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.78□□□□□ -0.2
HIST1H1AQ02539 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 TSPY7P-201ENST00000431358 1114 ntBASIC13.78□□□□□ -0.2
HIST1H1AQ02539 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 AC134043.2-201ENST00000624206 2238 ntBASIC13.78□□□□□ -0.2
HIST1H1AQ02539 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST1H1AQ02539 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HIST1H1AQ02539 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 FLJ13224-201ENST00000313737 1514 ntBASIC13.77□□□□□ -0.21
HIST1H1AQ02539 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 RBM17P1-201ENST00000453646 1190 ntBASIC13.77□□□□□ -0.21
HIST1H1AQ02539 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 GMCL1P1-201ENST00000463439 1581 ntBASIC13.77□□□□□ -0.21
HIST1H1AQ02539 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.77□□□□□ -0.21
HIST1H1AQ02539 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms