Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TPM4P67936 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM4P67936 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TPM4P67936 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM4P67936 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TPM4P67936 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.15■□□□□ 0.82
TPM4P67936 RARRES2P10-201ENST00000564312 460 ntBASIC20.15■□□□□ 0.82
TPM4P67936 KRT8P7-201ENST00000533003 1432 ntBASIC20.15■□□□□ 0.82
TPM4P67936 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TPM4P67936 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM4P67936 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.15■□□□□ 0.82
TPM4P67936 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM4P67936 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM4P67936 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TPM4P67936 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.15■□□□□ 0.82
TPM4P67936 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM4P67936 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM4P67936 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TPM4P67936 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TPM4P67936 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TPM4P67936 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.14■□□□□ 0.81
TPM4P67936 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM4P67936 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TPM4P67936 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
TPM4P67936 HOXB1-202ENST00000577092 1414 ntBASIC20.14■□□□□ 0.81
TPM4P67936 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM4P67936 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TPM4P67936 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.14■□□□□ 0.81
TPM4P67936 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TPM4P67936 MFAP1P1-201ENST00000442257 1255 ntBASIC20.14■□□□□ 0.81
TPM4P67936 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.14■□□□□ 0.81
TPM4P67936 CA15P1-201ENST00000481698 905 ntBASIC20.14■□□□□ 0.81
TPM4P67936 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.14■□□□□ 0.81
TPM4P67936 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.14■□□□□ 0.81
TPM4P67936 SLC25A1P4-201ENST00000567977 778 ntBASIC20.14■□□□□ 0.81
TPM4P67936 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.14■□□□□ 0.81
TPM4P67936 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM4P67936 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM4P67936 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM4P67936 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TPM4P67936 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
TPM4P67936 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TPM4P67936 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
TPM4P67936 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TPM4P67936 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
TPM4P67936 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM4P67936 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.14■□□□□ 0.81
TPM4P67936 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TPM4P67936 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.13■□□□□ 0.81
TPM4P67936 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TPM4P67936 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM4P67936 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.13■□□□□ 0.81
TPM4P67936 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.13■□□□□ 0.81
TPM4P67936 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM4P67936 KRT18P23-201ENST00000435622 1283 ntBASIC20.13■□□□□ 0.81
TPM4P67936 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM4P67936 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 DGCR10-201ENST00000609839 495 ntBASIC20.13■□□□□ 0.81
TPM4P67936 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TPM4P67936 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
TPM4P67936 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TPM4P67936 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM4P67936 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM4P67936 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
TPM4P67936 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TPM4P67936 AL138688.1-201ENST00000624851 1594 ntBASIC20.12■□□□□ 0.81
TPM4P67936 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 AL355312.1-201ENST00000407115 2176 ntBASIC20.12■□□□□ 0.81
TPM4P67936 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TPM4P67936 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.12■□□□□ 0.81
TPM4P67936 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM4P67936 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms