Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.88■□□□□ 0.29
RPS3AP61247 AC140113.3-201ENST00000605663 199 ntBASIC16.88■□□□□ 0.29
RPS3AP61247 AC008622.2-201ENST00000617006 1229 ntBASIC16.88■□□□□ 0.29
RPS3AP61247 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RPS3AP61247 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPS3AP61247 AL162741.1-201ENST00000565563 1558 ntBASIC16.88■□□□□ 0.29
RPS3AP61247 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RPS3AP61247 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
RPS3AP61247 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS3AP61247 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 LINC01126-201ENST00000623515 1646 ntBASIC16.88■□□□□ 0.29
RPS3AP61247 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RPS3AP61247 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.88■□□□□ 0.29
RPS3AP61247 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS3AP61247 KRT8P45-201ENST00000414328 1447 ntBASIC16.87■□□□□ 0.29
RPS3AP61247 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.87■□□□□ 0.29
RPS3AP61247 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RPS3AP61247 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.87■□□□□ 0.29
RPS3AP61247 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.87■□□□□ 0.29
RPS3AP61247 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.87■□□□□ 0.29
RPS3AP61247 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RPS3AP61247 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.87■□□□□ 0.29
RPS3AP61247 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.87■□□□□ 0.29
RPS3AP61247 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RPS3AP61247 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RPS3AP61247 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.87■□□□□ 0.29
RPS3AP61247 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.87■□□□□ 0.29
RPS3AP61247 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.87■□□□□ 0.29
RPS3AP61247 AL023284.2-201ENST00000405850 579 ntBASIC16.87■□□□□ 0.29
RPS3AP61247 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.87■□□□□ 0.29
RPS3AP61247 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.87■□□□□ 0.29
RPS3AP61247 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RPS3AP61247 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 AL049597.2-201ENST00000565575 961 ntBASIC16.87■□□□□ 0.29
RPS3AP61247 LINC01238-205ENST00000567549 1107 ntBASIC16.87■□□□□ 0.29
RPS3AP61247 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.87■□□□□ 0.29
RPS3AP61247 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.87■□□□□ 0.29
RPS3AP61247 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 GPAT2P1-201ENST00000444924 1672 ntBASIC16.87■□□□□ 0.29
RPS3AP61247 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.87■□□□□ 0.29
RPS3AP61247 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RPS3AP61247 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
RPS3AP61247 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS3AP61247 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RPS3AP61247 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPS3AP61247 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS3AP61247 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.86■□□□□ 0.29
RPS3AP61247 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RPS3AP61247 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RPS3AP61247 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPS3AP61247 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.86■□□□□ 0.29
RPS3AP61247 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.86■□□□□ 0.29
RPS3AP61247 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.86■□□□□ 0.29
RPS3AP61247 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS3AP61247 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
RPS3AP61247 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS3AP61247 MIR1224-201ENST00000408193 85 ntBASIC16.86■□□□□ 0.29
RPS3AP61247 AK4P3-201ENST00000418260 669 ntBASIC16.86■□□□□ 0.29
RPS3AP61247 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.86■□□□□ 0.29
RPS3AP61247 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.86■□□□□ 0.29
RPS3AP61247 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.86■□□□□ 0.29
RPS3AP61247 WWOX-216ENST00000569818 525 ntBASIC16.86■□□□□ 0.29
RPS3AP61247 NEK4P2-201ENST00000580004 1012 ntBASIC16.86■□□□□ 0.29
RPS3AP61247 MIR3180-5-201ENST00000583743 153 ntBASIC16.86■□□□□ 0.29
RPS3AP61247 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS3AP61247 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS3AP61247 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS3AP61247 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RPS3AP61247 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.86■□□□□ 0.29
RPS3AP61247 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.86■□□□□ 0.29
RPS3AP61247 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS3AP61247 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RPS3AP61247 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.86■□□□□ 0.29
RPS3AP61247 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RPS3AP61247 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms