Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN20P56880 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLDN20P56880 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLDN20P56880 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLDN20P56880 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN20P56880 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN20P56880 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN20P56880 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN20P56880 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN20P56880 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN20P56880 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN20P56880 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN20P56880 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN20P56880 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN20P56880 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN20P56880 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CLDN20P56880 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN20P56880 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN20P56880 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
CLDN20P56880 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN20P56880 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN20P56880 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN20P56880 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLDN20P56880 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN20P56880 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN20P56880 UPK3BP1-201ENST00000428678 509 ntBASIC16.47■□□□□ 0.23
CLDN20P56880 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLDN20P56880 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN20P56880 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN20P56880 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN20P56880 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN20P56880 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN20P56880 GNAS-203ENST00000306120 1878 ntBASIC16.47■□□□□ 0.23
CLDN20P56880 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN20P56880 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN20P56880 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN20P56880 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN20P56880 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN20P56880 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CLDN20P56880 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN20P56880 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN20P56880 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN20P56880 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CLDN20P56880 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN20P56880 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CLDN20P56880 HCG11-201ENST00000411553 5696 ntBASIC16.46■□□□□ 0.23
CLDN20P56880 AC084018.2-201ENST00000613093 2607 ntBASIC16.46■□□□□ 0.23
CLDN20P56880 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CLDN20P56880 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN20P56880 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN20P56880 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN20P56880 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms