Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.43□□□□□ -0.1
PAX9P55771 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PAX9P55771 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.43□□□□□ -0.1
PAX9P55771 AC046158.3-201ENST00000624947 2558 ntBASIC14.43□□□□□ -0.1
PAX9P55771 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.43□□□□□ -0.1
PAX9P55771 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 PCDHA14-201ENST00000506751 2298 ntBASIC14.43□□□□□ -0.1
PAX9P55771 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PAX9P55771 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.43□□□□□ -0.1
PAX9P55771 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.43□□□□□ -0.1
PAX9P55771 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.43□□□□□ -0.1
PAX9P55771 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.43□□□□□ -0.1
PAX9P55771 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
PAX9P55771 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.43□□□□□ -0.1
PAX9P55771 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.43□□□□□ -0.1
PAX9P55771 MIR4674-201ENST00000582457 87 ntBASIC14.43□□□□□ -0.1
PAX9P55771 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.43□□□□□ -0.1
PAX9P55771 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
PAX9P55771 AC096733.2-201ENST00000609937 1394 ntBASIC14.43□□□□□ -0.1
PAX9P55771 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PAX9P55771 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PAX9P55771 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PAX9P55771 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.42□□□□□ -0.1
PAX9P55771 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.42□□□□□ -0.1
PAX9P55771 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PAX9P55771 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
PAX9P55771 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.42□□□□□ -0.1
PAX9P55771 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.42□□□□□ -0.1
PAX9P55771 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.42□□□□□ -0.1
PAX9P55771 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.42□□□□□ -0.1
PAX9P55771 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.42□□□□□ -0.1
PAX9P55771 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.42□□□□□ -0.1
PAX9P55771 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.42□□□□□ -0.1
PAX9P55771 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.42□□□□□ -0.1
PAX9P55771 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PAX9P55771 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.42□□□□□ -0.1
PAX9P55771 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PAX9P55771 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PAX9P55771 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.42□□□□□ -0.1
PAX9P55771 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PAX9P55771 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PAX9P55771 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PAX9P55771 KRT8P7-201ENST00000533003 1432 ntBASIC14.41□□□□□ -0.1
PAX9P55771 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PAX9P55771 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PAX9P55771 PCDH8P1-201ENST00000428983 2773 ntBASIC14.41□□□□□ -0.1
PAX9P55771 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.41□□□□□ -0.1
PAX9P55771 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PAX9P55771 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.41□□□□□ -0.1
PAX9P55771 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PAX9P55771 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PAX9P55771 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.41□□□□□ -0.1
PAX9P55771 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.41□□□□□ -0.1
PAX9P55771 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.41□□□□□ -0.1
PAX9P55771 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PAX9P55771 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PAX9P55771 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.41□□□□□ -0.1
PAX9P55771 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PAX9P55771 AL353807.1-201ENST00000427475 662 ntBASIC14.41□□□□□ -0.1
PAX9P55771 KRT18P23-201ENST00000435622 1283 ntBASIC14.41□□□□□ -0.1
PAX9P55771 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms